Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tol-pal system-associated acyl-coa thioesterase | CD58_RS22615 | Not Available | Negative | 5265748 - 5266215 | 17416.8 |
| holliday junction branch migration dna helicase ruvb | CD58_RS22620 | Not Available | Negative | 5266343 - 5267404 | 39194.4 |
| holliday junction branch migration protein ruva | CD58_RS22625 | Not Available | Negative | 5267405 - 5268013 | 22156.2 |
| crossover junction endodeoxyribonuclease ruvc | CD58_RS22630 | Not Available | Negative | 5268128 - 5268652 | 18410.6 |
| yebc/pmpr family dna-binding transcriptional regulator | CD58_RS22635 | Not Available | Negative | 5268805 - 5269551 | 26672.1 |
| aspartate--trna ligase | CD58_RS22640 | Not Available | Negative | 5269671 - 5271446 | 66288.6 |
| fmdb family zinc ribbon protein | CD58_RS22645 | Not Available | Negative | 5271522 - 5271743 | 7874.52 |
| ribbon-helix-helix domain-containing protein | CD58_RS22650 | Not Available | Negative | 5271891 - 5272235 | 12922.8 |
| dps family protein | CD58_RS22655 | Not Available | Negative | 5272444 - 5272917 | 17808.4 |
| cold-shock protein | CD58_RS31700 | Not Available | Positive | 5273313 - 5273918 | 21881.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
