Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine ammonia-lyase | CD58_RS01775 | Not Available | Positive | 411397 - 412920 | 53994.3 |
| histidine ammonia-lyase | CD58_RS01780 | Not Available | Positive | 413051 - 414583 | 53913.9 |
| imidazolonepropionase | CD58_RS01785 | Not Available | Positive | 414710 - 415912 | 43084.7 |
| n-formylglutamate deformylase | CD58_RS01790 | Not Available | Positive | 415924 - 416727 | 30046.9 |
| choline abc transporter substrate-binding protein | CD58_RS01795 | Not Available | Positive | 417038 - 417985 | 34236.3 |
| alpha/beta hydrolase | CD58_RS01800 | Not Available | Positive | 418149 - 419060 | 32701.2 |
| prolyl aminopeptidase | CD58_RS01805 | Not Available | Positive | 419166 - 420137 | 36582.3 |
| d-aminoacyl-trna deacylase | CD58_RS01810 | Not Available | Positive | 420134 - 420571 | 15357.6 |
| glucan biosynthesis protein g | CD58_RS01815 | Not Available | Positive | 420892 - 422670 | 66642.6 |
| glucans biosynthesis glucosyltransferase mdoh | CD58_RS01820 | Not Available | Positive | 422663 - 425233 | 96560.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
