Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CD58_RS22565 | Not Available | Positive | 5258103 - 5259038 | 35298.5 |
| Trna-lys | Not Available | Not Available | Positive | 5259164 - 5259239 | Not Available |
| 7-cyano-7-deazaguanine synthase quec | CD58_RS22575 | Not Available | Negative | 5259303 - 5259977 | 23920.5 |
| 7-carboxy-7-deazaguanine synthase quee | CD58_RS22580 | Not Available | Negative | 5259997 - 5260644 | 24085.6 |
| tol-pal system protein ybgf | CD58_RS22585 | Not Available | Negative | 5260811 - 5261653 | 29485.5 |
| peptidoglycan-associated lipoprotein pal | CD58_RS22590 | Not Available | Negative | 5261660 - 5262157 | 17719.8 |
| tol-pal system beta propeller repeat protein tolb | CD58_RS22595 | Not Available | Negative | 5262210 - 5263490 | 46638.6 |
| cell envelope integrity protein tola | CD58_RS22600 | Not Available | Negative | 5263508 - 5264587 | 38766.9 |
| protein tolr | CD58_RS22605 | Not Available | Negative | 5264587 - 5265039 | 16353.1 |
| protein tolq | CD58_RS22610 | Not Available | Negative | 5265063 - 5265758 | 25342.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
