Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper homeostasis periplasmic binding protein copc | CD58_RS22515 | Not Available | Positive | 5247296 - 5247682 | 13389.4 |
| copper homeostasis membrane protein copd | CD58_RS22520 | Not Available | Positive | 5247687 - 5248598 | 32652.5 |
| cyanate transporter | CD58_RS22525 | Not Available | Positive | 5248852 - 5250039 | 42360.3 |
| dmt family transporter | CD58_RS22530 | Not Available | Positive | 5250109 - 5251020 | 32909.6 |
| amidase | CD58_RS22535 | Not Available | Negative | 5251027 - 5252442 | 51027.4 |
| aspartate aminotransferase family protein | CD58_RS22540 | Not Available | Negative | 5252445 - 5253785 | 49344.8 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | CD58_RS22545 | Not Available | Negative | 5253763 - 5254887 | 39913.9 |
| taud/tfda family dioxygenase | CD58_RS22550 | Not Available | Negative | 5254896 - 5255777 | 32720.6 |
| amp-binding protein | CD58_RS22555 | Not Available | Negative | 5255752 - 5257317 | 56557.3 |
| thermostable hemolysin | CD58_RS22560 | Not Available | Negative | 5257314 - 5257931 | 23098.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
