Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent transcriptional regulator | CD58_RS22465 | Not Available | Positive | 5233720 - 5235228 | 54753.2 |
| glycine cleavage system protein gcvh | CD58_RS22470 | Not Available | Positive | 5235657 - 5236040 | 13897.0 |
| aminomethyl-transferring glycine dehydrogenase | CD58_RS22475 | Not Available | Positive | 5236051 - 5238900 | 102487.0 |
| l-serine ammonia-lyase | CD58_RS22480 | Not Available | Positive | 5239100 - 5240476 | 48979.1 |
| glycine cleavage system aminomethyltransferase gcvt | CD58_RS22485 | Not Available | Positive | 5240516 - 5241640 | 39946.5 |
| cold-shock protein | CD58_RS22490 | Not Available | Positive | 5242035 - 5242247 | 7708.07 |
| rdd family protein | CD58_RS22495 | Not Available | Positive | 5242342 - 5242830 | 18191.7 |
| quinolinate synthase nada | CD58_RS22500 | Not Available | Negative | 5243019 - 5244077 | 38288.2 |
| copper resistance system multicopper oxidase | CD58_RS22505 | Not Available | Positive | 5244554 - 5246329 | 66117.0 |
| copper resistance protein b | CD58_RS22510 | Not Available | Positive | 5246341 - 5247243 | 32939.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
