Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter atp-binding protein | CD58_RS22415 | Not Available | Positive | 5221921 - 5223461 | 53035.5 |
| glutamate/aspartate abc transporter substrate-binding protein | CD58_RS22420 | Not Available | Positive | 5223908 - 5224822 | 33158.0 |
| amino acid abc transporter permease | CD58_RS22425 | Not Available | Positive | 5225013 - 5225759 | 27715.4 |
| amino acid abc transporter permease | CD58_RS22430 | Not Available | Positive | 5225759 - 5226430 | 24531.9 |
| amino acid abc transporter atp-binding protein | CD58_RS22435 | Not Available | Positive | 5226427 - 5227161 | 27043.0 |
| atp-binding protein | CD58_RS22440 | Not Available | Positive | 5227324 - 5229228 | 70803.9 |
| sigma-54-dependent transcriptional regulator | CD58_RS22445 | Not Available | Positive | 5229225 - 5230553 | 49058.8 |
| nad(p)-dependent oxidoreductase | CD58_RS22450 | Not Available | Negative | 5230747 - 5231361 | 21862.0 |
| mbl fold metallo-hydrolase | CD58_RS22455 | Not Available | Negative | 5231604 - 5232482 | 31539.1 |
| lysr family transcriptional regulator | CD58_RS22460 | Not Available | Positive | 5232597 - 5233502 | 33356.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
