Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| grx4 family monothiol glutaredoxin | CD58_RS22365 | Not Available | Negative | 5211082 - 5211423 | 12091.5 |
| molybdopterin oxidoreductase family protein | CD58_RS22370 | Not Available | Negative | 5211524 - 5213632 | 76039.1 |
| hypothetical protein | CD58_RS22375 | Not Available | Negative | 5213764 - 5214051 | 10563.7 |
| ornithine carbamoyltransferase | CD58_RS22380 | Not Available | Positive | 5214454 - 5215374 | 34130.1 |
| abc transporter atp-binding protein | CD58_RS22385 | Not Available | Positive | 5215371 - 5216480 | 40435.4 |
| phzf family phenazine biosynthesis protein | CD58_RS22390 | Not Available | Negative | 5216554 - 5217336 | 28218.7 |
| cys-trna(pro) deacylase | CD58_RS22395 | Not Available | Negative | 5217525 - 5217995 | 16352.9 |
| mip/aquaporin family protein | CD58_RS22400 | Not Available | Positive | 5218318 - 5219169 | 29883.9 |
| glycerol kinase glpk | CD58_RS22405 | Not Available | Positive | 5219261 - 5220766 | 55614.9 |
| deor/glpr family transcriptional regulator | CD58_RS22410 | Not Available | Positive | 5220852 - 5221607 | 27741.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
