Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hugz family protein | CD58_RS22260 | Not Available | Negative | 5192961 - 5193692 | 27114.3 |
| sdr family oxidoreductase | CD58_RS22265 | Not Available | Positive | 5193854 - 5194612 | 26920.8 |
| iron-sulfur cluster carrier protein apbc | CD58_RS22270 | Not Available | Negative | 5194733 - 5195827 | 38359.5 |
| methionine--trna ligase | CD58_RS22275 | Not Available | Positive | 5196103 - 5198148 | 75500.7 |
| rnf-nqr domain containing protein | CD58_RS22280 | Not Available | Positive | 5198280 - 5198852 | 20673.0 |
| electron transport complex subunit rsxb | CD58_RS22285 | Not Available | Positive | 5198849 - 5199874 | 36746.4 |
| metal abc transporter atp-binding protein | CD58_RS22290 | Not Available | Positive | 5199861 - 5200846 | 35064.0 |
| rnfabcdge type electron transport complex subunit g | CD58_RS22295 | Not Available | Positive | 5200843 - 5201454 | 21542.7 |
| rnf-nqr domain containing protein | CD58_RS22300 | Not Available | Positive | 5201447 - 5201980 | 18865.8 |
| endonuclease iii | CD58_RS22305 | Not Available | Positive | 5201977 - 5202615 | 23818.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
