Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CD58_RS22110 | Not Available | Positive | 5162145 - 5163344 | 41409.5 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | CD58_RS22115 | Not Available | Negative | 5163341 - 5163754 | 15264.5 |
| amino acid permease | CD58_RS22120 | Not Available | Negative | 5163922 - 5165340 | 51128.6 |
| hypothetical protein | CD58_RS31290 | Not Available | Positive | 5166087 - 5166224 | 5107.04 |
| leucyl aminopeptidase (aminopeptidase t) | CD58_RS22130 | Not Available | Positive | 5166318 - 5167283 | 35639.9 |
| 23s rrna pseudouridine(2605) synthase rlub | CD58_RS22135 | Not Available | Negative | 5167554 - 5168789 | 45957.1 |
| smc-scp complex subunit scpb | CD58_RS22140 | Not Available | Negative | 5169136 - 5170089 | 35893.3 |
| segregation and condensation protein a | CD58_RS22145 | Not Available | Negative | 5170101 - 5170799 | 26361.3 |
| l-threonylcarbamoyladenylate synthase | CD58_RS22150 | Not Available | Negative | 5170932 - 5171561 | 22926.2 |
| php domain-containing protein | CD58_RS22155 | Not Available | Negative | 5171575 - 5172438 | 31210.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
