Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipocalin family protein | CD58_RS01730 | Not Available | Positive | 401204 - 401773 | 21586.8 |
| formimidoylglutamate deiminase | CD58_RS01735 | Not Available | Negative | 401895 - 403259 | 49769.1 |
| histidine utilization repressor | CD58_RS01740 | Not Available | Positive | 403403 - 404113 | 26641.9 |
| hutd family protein | CD58_RS01745 | Not Available | Positive | 404110 - 404679 | 20373.2 |
| urocanate hydratase | CD58_RS01750 | Not Available | Positive | 405130 - 406818 | 61426.2 |
| metal abc transporter atp-binding protein | CD58_RS31335 | Not Available | Positive | 406808 - 406924 | 3962.71 |
| purine-cytosine permease family protein | CD58_RS01755 | Not Available | Positive | 406970 - 408436 | 51989.3 |
| abc transporter substrate-binding protein | CD58_RS01760 | Not Available | Positive | 408507 - 409475 | 35211.3 |
| abc transporter permease | CD58_RS01765 | Not Available | Positive | 409547 - 410398 | 30730.9 |
| glycine betaine/l-proline abc transporter atp-binding protein | CD58_RS01770 | Not Available | Positive | 410395 - 411225 | 30635.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
