Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CD58_RS22065 | Not Available | Negative | 5154230 - 5155177 | 34482.8 |
| ctp synthase | CD58_RS22070 | Not Available | Positive | 5155192 - 5155902 | 26363.3 |
| antibiotic biosynthesis monooxygenase family protein | CD58_RS22075 | Not Available | Positive | 5155899 - 5156213 | 11944.0 |
| duf2025 family protein | CD58_RS22080 | Not Available | Negative | 5156347 - 5156673 | 12136.6 |
| glycerophosphodiester phosphodiesterase | CD58_RS22085 | Not Available | Positive | 5156917 - 5158044 | 41053.1 |
| pepsy domain-containing protein | CD58_RS22090 | Not Available | Positive | 5158195 - 5158500 | 10918.8 |
| methyl-accepting chemotaxis protein | CD58_RS22095 | Not Available | Negative | 5158580 - 5160205 | 58574.7 |
| transporter | CD58_RS22100 | Not Available | Positive | 5160464 - 5161486 | 38473.5 |
| hypothetical protein | CD58_RS31285 | Not Available | Positive | 5161629 - 5161772 | 5242.86 |
| hypothetical protein | CD58_RS22105 | Not Available | Positive | 5161848 - 5162042 | 6928.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
