Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bro-n domain-containing protein | CD58_RS22015 | Not Available | Positive | 5145807 - 5146316 | 20197.5 |
| metal abc transporter atp-binding protein | CD58_RS31695 | Not Available | Positive | 5146511 - 5146639 | 4731.57 |
| hypothetical protein | CD58_RS22025 | Not Available | Positive | 5147316 - 5148302 | 37420.0 |
| duf4179 domain-containing protein | CD58_RS22030 | Not Available | Negative | 5148299 - 5149495 | 43820.7 |
| sulfite exporter taue/safe family protein | CD58_RS22035 | Not Available | Negative | 5149621 - 5150436 | 28670.0 |
| arac family transcriptional regulator | CD58_RS22040 | Not Available | Positive | 5150549 - 5151325 | 28349.4 |
| multiprotein-bridging factor 1 family protein | CD58_RS22045 | Not Available | Positive | 5151408 - 5151725 | 11500.9 |
| mbl fold metallo-hydrolase | CD58_RS22050 | Not Available | Negative | 5151741 - 5152799 | 40009.4 |
| tetr/acrr family transcriptional regulator | CD58_RS22055 | Not Available | Positive | 5152990 - 5153598 | 22846.5 |
| duf1003 domain-containing protein | CD58_RS22060 | Not Available | Negative | 5153642 - 5154172 | 19613.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
