Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator argr | CD58_RS21970 | Not Available | Negative | 5135877 - 5136857 | 36301.6 |
| abc transporter atp-binding protein | CD58_RS21975 | Not Available | Negative | 5136971 - 5137735 | 27932.0 |
| abc transporter permease | CD58_RS21980 | Not Available | Negative | 5137792 - 5138490 | 26184.7 |
| abc transporter permease | CD58_RS21985 | Not Available | Negative | 5138487 - 5139176 | 24860.2 |
| abc transporter substrate-binding protein | CD58_RS21990 | Not Available | Negative | 5139267 - 5140040 | 27879.6 |
| acetate--coa ligase | CD58_RS21995 | Not Available | Negative | 5140811 - 5142766 | 71298.0 |
| duf2790 domain-containing protein | CD58_RS22000 | Not Available | Positive | 5143198 - 5143461 | 9506.45 |
| hypothetical protein | CD58_RS22005 | Not Available | Positive | 5143493 - 5143672 | 6023.99 |
| hypothetical protein | CD58_RS30760 | Not Available | Negative | 5143831 - 5144133 | 11266.7 |
| ribonucleotide-diphosphate reductase subunit beta | CD58_RS22010 | Not Available | Positive | 5144162 - 5145409 | 47114.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
