Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine--trna ligase | CD58_RS21920 | Not Available | Negative | 5122692 - 5125313 | 94361.9 |
| low-specificity l-threonine aldolase | CD58_RS21925 | Not Available | Negative | 5125460 - 5126464 | 35797.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | CD58_RS21930 | Not Available | Positive | 5126986 - 5127495 | 18853.6 |
| succinylglutamate desuccinylase | CD58_RS21935 | Not Available | Negative | 5127619 - 5128626 | 37437.8 |
| hypothetical protein | CD58_RS21940 | Not Available | Negative | 5128639 - 5128926 | 10542.2 |
| n-succinylarginine dihydrolase | CD58_RS21945 | Not Available | Negative | 5128996 - 5130342 | 48806.9 |
| succinylglutamate-semialdehyde dehydrogenase | CD58_RS21950 | Not Available | Negative | 5130474 - 5131943 | 51640.8 |
| arginine n-succinyltransferase | CD58_RS21955 | Not Available | Negative | 5131940 - 5132965 | 37293.6 |
| arginine/ornithine succinyltransferase subunit alpha | CD58_RS21960 | Not Available | Negative | 5133021 - 5134040 | 36990.9 |
| aspartate aminotransferase family protein | CD58_RS21965 | Not Available | Negative | 5134246 - 5135466 | 43252.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
