Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body rod protein flgb | CD58_RS21820 | Not Available | Negative | 5106221 - 5106628 | 14969.4 |
| protein-glutamate o-methyltransferase cher | CD58_RS21825 | Not Available | Negative | 5106982 - 5107809 | 30851.4 |
| chemotaxis protein chev | CD58_RS21830 | Not Available | Negative | 5107863 - 5108789 | 34313.8 |
| flagellar basal body p-ring formation chaperone flga | CD58_RS21835 | Not Available | Positive | 5108868 - 5109632 | 28058.3 |
| flagellar biosynthesis anti-sigma factor flgm | CD58_RS21840 | Not Available | Positive | 5109806 - 5110120 | 11243.1 |
| flagella synthesis protein flgn | CD58_RS21845 | Not Available | Positive | 5110168 - 5110635 | 16917.2 |
| flagellar brake protein | CD58_RS21850 | Not Available | Positive | 5110728 - 5111474 | 28275.7 |
| mfs transporter | CD58_RS21855 | Not Available | Negative | 5111541 - 5112914 | 49832.0 |
| glutamine synthetase family protein | CD58_RS21860 | Not Available | Negative | 5112984 - 5114225 | 44945.5 |
| sensor histidine kinase | CD58_RS21865 | Not Available | Negative | 5114571 - 5115263 | 25289.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
