Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | CD58_RS21765 | Not Available | Negative | 5094004 - 5094681 | 25567.8 |
| outer membrane beta-barrel protein | CD58_RS21770 | Not Available | Negative | 5094786 - 5095385 | 21138.7 |
| dienelactone hydrolase family protein | CD58_RS21775 | Not Available | Positive | 5095529 - 5096320 | 28175.5 |
| 4'-phosphopantetheinyl transferase | CD58_RS21785 | Not Available | Positive | 5096547 - 5097272 | 26531.0 |
| atp-binding protein | CD58_RS21790 | Not Available | Negative | 5097390 - 5099000 | 59423.0 |
| response regulator | CD58_RS21795 | Not Available | Negative | 5098997 - 5099719 | 26925.5 |
| ribonucleoside-diphosphate reductase subunit alpha | CD58_RS21800 | Not Available | Positive | 5100546 - 5103437 | 107279.0 |
| flagellar hook protein flge | CD58_RS21805 | Not Available | Negative | 5103707 - 5105005 | 44952.1 |
| flagellar hook assembly protein flgd | CD58_RS21810 | Not Available | Negative | 5105036 - 5105758 | 24388.7 |
| flagellar basal body rod protein flgc | CD58_RS21815 | Not Available | Negative | 5105774 - 5106217 | 15754.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
