Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h:quinone oxidoreductase | CD58_RS21715 | Not Available | Positive | 5083976 - 5084581 | 21038.3 |
| duf2069 domain-containing protein | CD58_RS21720 | Not Available | Positive | 5084574 - 5084999 | 15598.8 |
| dna-3-methyladenine glycosylase i | CD58_RS21725 | Not Available | Negative | 5085085 - 5085759 | 25576.9 |
| trna 2-thiocytidine(32) synthetase ttca | CD58_RS21730 | Not Available | Negative | 5085841 - 5086665 | 31151.7 |
| yip1 family protein | CD58_RS21735 | Not Available | Positive | 5086975 - 5087577 | 21735.0 |
| sprt family zinc-dependent metalloprotease | CD58_RS21740 | Not Available | Positive | 5087735 - 5088229 | 19483.4 |
| caib/baif coa transferase family protein | CD58_RS21745 | Not Available | Negative | 5088347 - 5089528 | 41881.5 |
| dicarboxylate/amino acid:cation symporter | CD58_RS21750 | Not Available | Negative | 5089833 - 5091185 | 47584.7 |
| arac family transcriptional regulator | CD58_RS21755 | Not Available | Positive | 5091519 - 5092517 | 37847.2 |
| atp-binding protein | CD58_RS21760 | Not Available | Negative | 5092661 - 5094007 | 50438.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
