Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | CD58_RS21665 | Not Available | Positive | 5071780 - 5073054 | 47477.9 |
| peptidase domain-containing abc transporter | CD58_RS21670 | Not Available | Positive | 5073066 - 5075201 | 79989.5 |
| tolc family protein | CD58_RS29510 | Not Available | Positive | 5075198 - 5076610 | 51642.3 |
| sbma/baca-like family transporter | CD58_RS21680 | Not Available | Positive | 5076656 - 5077783 | 42578.7 |
| response regulator | CD58_RS21685 | Not Available | Positive | 5078026 - 5080776 | 100676.0 |
| 2-hydroxyacid dehydrogenase | CD58_RS21690 | Not Available | Positive | 5080843 - 5081832 | 35539.8 |
| hypothetical protein | CD58_RS21695 | Not Available | Positive | 5082019 - 5082453 | 15607.9 |
| meta domain-containing protein | CD58_RS21700 | Not Available | Positive | 5082453 - 5082857 | 15342.6 |
| metal abc transporter atp-binding protein | CD58_RS21705 | Not Available | Negative | 5083043 - 5083509 | 17486.9 |
| arsenate reductase (glutaredoxin) | CD58_RS21710 | Not Available | Positive | 5083626 - 5083979 | 12835.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
