Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS21620 | Not Available | Positive | 5059870 - 5060064 | 7437.68 |
| duf2058 domain-containing protein | CD58_RS21625 | Not Available | Negative | 5060205 - 5060744 | 20591.6 |
| nucleoside triphosphate pyrophosphohydrolase | CD58_RS21630 | Not Available | Negative | 5060771 - 5061604 | 31662.6 |
| gtp diphosphokinase | CD58_RS21635 | Not Available | Negative | 5061733 - 5063979 | 83927.1 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | CD58_RS21640 | Not Available | Negative | 5064081 - 5065451 | 49884.1 |
| cysteine synthase cysm | CD58_RS21645 | Not Available | Negative | 5065451 - 5066353 | 32475.0 |
| response regulator transcription factor | CD58_RS29500 | Not Available | Positive | 5067374 - 5067574 | 7635.41 |
| hypothetical protein | CD58_RS21650 | Not Available | Negative | 5067561 - 5067794 | 8746.24 |
| hypothetical protein | CD58_RS28805 | Not Available | Positive | 5068191 - 5069942 | 65333.9 |
| hypothetical protein | CD58_RS21660 | Not Available | Negative | 5070705 - 5071172 | 17649.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
