Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS21570 | Not Available | Positive | 5049930 - 5050514 | 22154.2 |
| pqq-dependent sugar dehydrogenase | CD58_RS21575 | Not Available | Positive | 5050712 - 5052022 | 46442.0 |
| c40 family peptidase | CD58_RS21580 | Not Available | Negative | 5052206 - 5052739 | 18654.4 |
| c40 family peptidase | CD58_RS21585 | Not Available | Negative | 5052905 - 5053531 | 22620.1 |
| dnaa regulatory inactivator hda | CD58_RS21590 | Not Available | Negative | 5053746 - 5054450 | 26473.1 |
| ai-2e family transporter | CD58_RS21595 | Not Available | Negative | 5054621 - 5055694 | 38721.2 |
| duf2066 domain-containing protein | CD58_RS21600 | Not Available | Negative | 5055728 - 5056786 | 37669.8 |
| phosphoribosylformylglycinamidine cyclo-ligase | CD58_RS21605 | Not Available | Positive | 5057151 - 5058209 | 36847.6 |
| phosphoribosylglycinamide formyltransferase | CD58_RS21610 | Not Available | Positive | 5058209 - 5058859 | 23782.4 |
| duf3108 domain-containing protein | CD58_RS21615 | Not Available | Positive | 5058868 - 5059581 | 26412.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
