Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobinamide-gdp ribazoletransferase | CD58_RS21520 | Not Available | Negative | 5040483 - 5041211 | 25528.6 |
| alpha-ribazole phosphatase family protein | CD58_RS21525 | Not Available | Negative | 5041214 - 5041789 | 20615.8 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | CD58_RS21530 | Not Available | Negative | 5041786 - 5042841 | 36228.9 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | CD58_RS21535 | Not Available | Negative | 5042838 - 5043359 | 18839.0 |
| cobyric acid synthase | CD58_RS21540 | Not Available | Negative | 5043483 - 5044934 | 51942.4 |
| threonine-phosphate decarboxylase cobd | CD58_RS21545 | Not Available | Negative | 5044931 - 5045923 | 36592.3 |
| adenosylcobinamide-phosphate synthase cbib | CD58_RS21550 | Not Available | Negative | 5045916 - 5046824 | 32650.4 |
| 5,6-dimethylbenzimidazole synthase | CD58_RS21555 | Not Available | Negative | 5046821 - 5047471 | 24125.2 |
| cobyrinate a,c-diamide synthase | CD58_RS21560 | Not Available | Negative | 5047468 - 5048862 | 49470.8 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | CD58_RS21565 | Not Available | Negative | 5048859 - 5049485 | 22906.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
