Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | CD58_RS21470 | Not Available | Positive | 5028121 - 5028660 | 19551.7 |
| pas domain-containing hybrid sensor histidine kinase/response regulator | CD58_RS21475 | Not Available | Positive | 5028912 - 5032382 | 126961.0 |
| dna recombination protein rmuc | CD58_RS21480 | Not Available | Negative | 5032528 - 5033913 | 51960.2 |
| sel1 repeat family protein | CD58_RS21485 | Not Available | Negative | 5034089 - 5034412 | 11772.3 |
| hypothetical protein | CD58_RS21490 | Not Available | Positive | 5035516 - 5035740 | 8292.97 |
| hypothetical protein | CD58_RS21495 | Not Available | Positive | 5036017 - 5036499 | 17901.5 |
| ompp1/fadl family transporter | CD58_RS21500 | Not Available | Positive | 5036644 - 5037918 | 45573.0 |
| glutathione peroxidase | CD58_RS21505 | Not Available | Negative | 5038008 - 5038559 | 20122.4 |
| mfs transporter | CD58_RS21510 | Not Available | Negative | 5038742 - 5039950 | 42350.9 |
| marr family winged helix-turn-helix transcriptional regulator | CD58_RS21515 | Not Available | Negative | 5040003 - 5040407 | 14457.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
