Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 5020070 - 5020145 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 5020321 - 5020397 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 5020417 - 5020492 | Not Available |
| recombination-associated protein rdgc | CD58_RS21435 | Not Available | Positive | 5020653 - 5021573 | 34338.5 |
| bile acid:sodium symporter family protein | CD58_RS21440 | Not Available | Positive | 5021718 - 5022686 | 34586.5 |
| quaternary ammonium compound efflux smr transporter suge | CD58_RS21445 | Not Available | Positive | 5022804 - 5023118 | 10695.7 |
| mfs transporter | CD58_RS21450 | Not Available | Negative | 5023226 - 5025100 | 68489.9 |
| tdt family transporter | CD58_RS21455 | Not Available | Negative | 5025181 - 5026329 | 41484.2 |
| cupin | CD58_RS21460 | Not Available | Negative | 5026433 - 5026744 | 11464.7 |
| mfs transporter | CD58_RS21465 | Not Available | Negative | 5026824 - 5028017 | 41618.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
