Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS21370 | Not Available | Negative | 5008513 - 5008929 | 16505.3 |
| rhs repeat-associated core domain-containing protein | CD58_RS21375 | Not Available | Negative | 5008929 - 5013731 | 180410.0 |
| sel1 repeat family protein | CD58_RS21380 | Not Available | Negative | 5013951 - 5014352 | 14835.0 |
| hypothetical protein | CD58_RS21385 | Not Available | Negative | 5014353 - 5014724 | 13760.3 |
| helix-turn-helix domain-containing protein | CD58_RS21390 | Not Available | Negative | 5014721 - 5015062 | 12361.7 |
| ykva family protein | CD58_RS21395 | Not Available | Negative | 5015177 - 5015632 | 17141.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CD58_RS21400 | Not Available | Negative | 5015927 - 5016640 | 25055.0 |
| di-heme-cytochrome c peroxidase | CD58_RS21405 | Not Available | Positive | 5016910 - 5018715 | 66847.4 |
| catalase family protein | CD58_RS21410 | Not Available | Positive | 5018747 - 5019883 | 42351.3 |
| Trna-asp | Not Available | Not Available | Positive | 5019976 - 5020052 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
