Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase family protein | CD58_RS21320 | Not Available | Positive | 4997729 - 4998535 | 29970.4 |
| abc transporter permease subunit | CD58_RS21325 | Not Available | Positive | 4998541 - 4999377 | 30854.3 |
| abc transporter permease | CD58_RS21330 | Not Available | Positive | 4999364 - 5000164 | 29316.7 |
| abc transporter atp-binding protein | CD58_RS21335 | Not Available | Positive | 5000161 - 5001150 | 36375.0 |
| had family hydrolase | CD58_RS21340 | Not Available | Positive | 5001185 - 5001838 | 24489.2 |
| hypothetical protein | CD58_RS21345 | Not Available | Negative | 5001983 - 5002225 | 9037.63 |
| zinc-binding dehydrogenase | CD58_RS21350 | Not Available | Negative | 5002569 - 5003531 | 33418.3 |
| carboxy terminal-processing peptidase | CD58_RS21355 | Not Available | Positive | 5003671 - 5005749 | 77608.9 |
| bifunctional diguanylate cyclase/phosphodiesterase | CD58_RS21360 | Not Available | Positive | 5005880 - 5007667 | 66263.8 |
| hypothetical protein | CD58_RS21365 | Not Available | Negative | 5007882 - 5008298 | 16278.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
