Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin-like phospholipase family protein | CD58_RS21270 | Not Available | Negative | 4988329 - 4989489 | 40751.2 |
| lipid a biosynthesis lauroyl acyltransferase | CD58_RS21275 | Not Available | Negative | 4989531 - 4990463 | 35792.6 |
| septum site-determining protein minc | CD58_RS21280 | Not Available | Positive | 4990582 - 4991319 | 26143.8 |
| septum site-determining protein mind | CD58_RS21285 | Not Available | Positive | 4991520 - 4992332 | 29420.4 |
| cell division topological specificity factor mine | CD58_RS21290 | Not Available | Positive | 4992332 - 4992586 | 9482.39 |
| rlua family pseudouridine synthase | CD58_RS21295 | Not Available | Positive | 4992769 - 4993404 | 24028.8 |
| m18 family aminopeptidase | CD58_RS21300 | Not Available | Positive | 4993649 - 4994938 | 47062.8 |
| hypothetical protein | CD58_RS21305 | Not Available | Positive | 4995206 - 4995388 | 6561.57 |
| utra domain-containing protein | CD58_RS21310 | Not Available | Negative | 4995396 - 4996127 | 27599.3 |
| abc transporter substrate-binding protein | CD58_RS21315 | Not Available | Positive | 4996477 - 4997544 | 38160.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
