Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyse family translocator | CD58_RS21220 | Not Available | Positive | 4975591 - 4976220 | 22250.5 |
| calcium-binding protein | CD58_RS21225 | Not Available | Positive | 4976342 - 4980064 | 135647.0 |
| hypothetical protein | CD58_RS21230 | Not Available | Positive | 4980232 - 4981680 | 54311.3 |
| hydroxyisourate hydrolase | CD58_RS21235 | Not Available | Negative | 4981775 - 4982128 | 12958.2 |
| allantoinase puue | CD58_RS21240 | Not Available | Positive | 4982543 - 4983484 | 35952.6 |
| 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | CD58_RS21245 | Not Available | Positive | 4983481 - 4983996 | 18999.5 |
| allantoicase | CD58_RS21250 | Not Available | Positive | 4984052 - 4985047 | 36735.1 |
| ureidoglycolate lyase | CD58_RS21255 | Not Available | Positive | 4985195 - 4985698 | 18690.5 |
| urate hydroxylase puud | CD58_RS21260 | Not Available | Positive | 4985750 - 4987051 | 47006.3 |
| outer membrane protein ompk | CD58_RS21265 | Not Available | Positive | 4987386 - 4988171 | 29862.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
