Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS21170 | Not Available | Positive | 4967099 - 4967887 | 30166.1 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | CD58_RS21175 | Not Available | Negative | 4968071 - 4968979 | 34170.6 |
| cysteine hydrolase family protein | CD58_RS21180 | Not Available | Positive | 4969234 - 4969824 | 20945.3 |
| hypothetical protein | CD58_RS21185 | Not Available | Positive | 4969955 - 4970275 | 11496.6 |
| smr/muts family protein | CD58_RS21190 | Not Available | Positive | 4970350 - 4970907 | 20734.0 |
| gtp cyclohydrolase i fole | CD58_RS21195 | Not Available | Positive | 4970985 - 4971530 | 20100.6 |
| glutathione s-transferase n-terminal domain-containing protein | CD58_RS21200 | Not Available | Positive | 4971634 - 4972005 | 14177.5 |
| plp-dependent aminotransferase family protein | CD58_RS21205 | Not Available | Negative | 4972160 - 4973326 | 42993.7 |
| marr family winged helix-turn-helix transcriptional regulator | CD58_RS21210 | Not Available | Positive | 4973408 - 4973845 | 16430.1 |
| ncs2 family permease | CD58_RS21215 | Not Available | Positive | 4974179 - 4975528 | 47101.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
