Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS21120 | Not Available | Negative | 4957761 - 4958291 | 18761.5 |
| ankyrin repeat domain-containing protein | CD58_RS21125 | Not Available | Negative | 4958544 - 4959062 | 18084.6 |
| long-chain-acyl-coa synthetase | CD58_RS21130 | Not Available | Negative | 4959157 - 4960983 | 66973.2 |
| duf3509 domain-containing protein | CD58_RS21135 | Not Available | Positive | 4961344 - 4961622 | 10404.4 |
| acireductone synthase | CD58_RS21140 | Not Available | Negative | 4961742 - 4962425 | 24635.0 |
| 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase | CD58_RS21145 | Not Available | Negative | 4962430 - 4962975 | 20495.0 |
| methylthioribulose 1-phosphate dehydratase | CD58_RS21150 | Not Available | Negative | 4962994 - 4963614 | 23094.4 |
| mfs transporter | CD58_RS21155 | Not Available | Negative | 4963611 - 4964756 | 42174.3 |
| chorismate synthase | CD58_RS21160 | Not Available | Negative | 4964791 - 4965882 | 39077.6 |
| alpha/beta hydrolase | CD58_RS21165 | Not Available | Positive | 4966025 - 4966990 | 34114.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
