Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | CD58_RS01630 | Not Available | Negative | 376205 - 376660 | 16973.3 |
| hypothetical protein | CD58_RS01635 | Not Available | Positive | 376659 - 377099 | 16250.6 |
| nitrogen regulation protein nr(i) | CD58_RS01640 | Not Available | Negative | 377591 - 379027 | 53138.4 |
| nitrogen regulation protein nr(ii) | CD58_RS01645 | Not Available | Negative | 379024 - 380109 | 40044.6 |
| duf4124 domain-containing protein | CD58_RS01650 | Not Available | Negative | 380341 - 380961 | 22774.5 |
| duf4124 domain-containing protein | CD58_RS01655 | Not Available | Negative | 380958 - 381479 | 18875.4 |
| chorismate mutase | CD58_RS01660 | Not Available | Negative | 381670 - 382227 | 20412.7 |
| type i glutamate--ammonia ligase | CD58_RS01665 | Not Available | Negative | 382348 - 383754 | 51899.4 |
| trna uracil 4-sulfurtransferase thii | CD58_RS01670 | Not Available | Positive | 384083 - 385537 | 54454.3 |
| translational gtpase typa | CD58_RS01675 | Not Available | Positive | 385676 - 387496 | 67037.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
