Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase, hydrophobic membrane anchor protein | CD58_RS21020 | Not Available | Negative | 4937625 - 4937993 | 13428.6 |
| succinate dehydrogenase, cytochrome b556 subunit | CD58_RS21025 | Not Available | Negative | 4937987 - 4938361 | 13244.8 |
| citrate synthase | CD58_RS21030 | Not Available | Positive | 4938726 - 4940015 | 47758.9 |
| cation acetate symporter | CD58_RS21035 | Not Available | Negative | 4940301 - 4941959 | 58581.0 |
| duf485 domain-containing protein | CD58_RS21040 | Not Available | Negative | 4941956 - 4942267 | 11497.2 |
| glycine betaine abc transporter substrate-binding protein | CD58_RS21045 | Not Available | Negative | 4942586 - 4943440 | 30940.2 |
| serine/threonine protein kinase | CD58_RS21050 | Not Available | Positive | 4943868 - 4945166 | 48593.4 |
| vacj family lipoprotein | CD58_RS21055 | Not Available | Positive | 4945159 - 4945947 | 29570.3 |
| duf808 domain-containing protein | CD58_RS21060 | Not Available | Negative | 4946081 - 4946995 | 31284.1 |
| tetr/acrr family transcriptional regulator | CD58_RS21065 | Not Available | Positive | 4947126 - 4947734 | 22609.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
