Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS20970 | Not Available | Positive | 4923826 - 4924077 | 8842.17 |
| duf599 domain-containing protein | CD58_RS20975 | Not Available | Negative | 4924147 - 4924884 | 27624.9 |
| branched-chain amino acid transport system ii carrier protein | CD58_RS20980 | Not Available | Negative | 4925158 - 4926471 | 45224.8 |
| succinate--coa ligase subunit alpha | CD58_RS20985 | Not Available | Negative | 4926968 - 4927852 | 30168.8 |
| adp-forming succinate--coa ligase subunit beta | CD58_RS20990 | Not Available | Negative | 4927852 - 4929018 | 41286.8 |
| dihydrolipoyl dehydrogenase | CD58_RS20995 | Not Available | Negative | 4929215 - 4930660 | 50175.8 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | CD58_RS21000 | Not Available | Negative | 4930772 - 4931995 | 42293.1 |
| 2-oxoglutarate dehydrogenase e1 component | CD58_RS21005 | Not Available | Negative | 4932039 - 4934870 | 106219.0 |
| succinate dehydrogenase iron-sulfur subunit | CD58_RS21010 | Not Available | Negative | 4935133 - 4935837 | 26125.6 |
| succinate dehydrogenase flavoprotein subunit | CD58_RS21015 | Not Available | Negative | 4935849 - 4937621 | 63489.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
