Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | CD58_RS20920 | Not Available | Positive | 4913055 - 4914956 | 70081.2 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase faba | CD58_RS20925 | Not Available | Positive | 4915193 - 4915708 | 18768.8 |
| beta-ketoacyl-acp synthase i | CD58_RS20930 | Not Available | Positive | 4915720 - 4916940 | 43154.6 |
| duf3859 domain-containing protein | CD58_RS20935 | Not Available | Negative | 4917136 - 4917600 | 17346.9 |
| amidohydrolase family protein | CD58_RS20940 | Not Available | Negative | 4917786 - 4918739 | 36529.4 |
| pirin family protein | CD58_RS20945 | Not Available | Positive | 4918922 - 4919782 | 31183.1 |
| dienelactone hydrolase family protein | CD58_RS20950 | Not Available | Negative | 4919943 - 4920671 | 25804.9 |
| molecular chaperone htpg | CD58_RS20955 | Not Available | Negative | 4920742 - 4922646 | 71413.6 |
| paai family thioesterase | CD58_RS20960 | Not Available | Negative | 4922734 - 4923195 | 16755.1 |
| paai family thioesterase | CD58_RS20965 | Not Available | Negative | 4923192 - 4923668 | 17251.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
