Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | CD58_RS20870 | Not Available | Negative | 4903454 - 4904491 | 37109.5 |
| duf4892 domain-containing protein | CD58_RS20875 | Not Available | Negative | 4904554 - 4905372 | 29605.2 |
| alpha/beta hydrolase | CD58_RS20880 | Not Available | Negative | 4905502 - 4906353 | 30687.3 |
| alpha/beta fold hydrolase | CD58_RS20885 | Not Available | Negative | 4906350 - 4907144 | 29923.1 |
| hotdog fold thioesterase | CD58_RS20890 | Not Available | Negative | 4907454 - 4907897 | 16053.3 |
| phosphohistidine phosphatase sixa | CD58_RS20895 | Not Available | Negative | 4907950 - 4908402 | 16454.8 |
| duf4389 domain-containing protein | CD58_RS20900 | Not Available | Negative | 4908399 - 4908746 | 12982.8 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | CD58_RS20905 | Not Available | Negative | 4908777 - 4909802 | 36459.3 |
| tonb-dependent receptor plug domain-containing protein | CD58_RS20910 | Not Available | Positive | 4910002 - 4912125 | 79061.9 |
| abc transporter substrate-binding protein | CD58_RS20915 | Not Available | Positive | 4912126 - 4913058 | 34525.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
