Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 4892322 - 4892397 | Not Available |
| hypothetical protein | CD58_RS20825 | Not Available | Positive | 4892771 - 4893529 | 28489.8 |
| methyl-accepting chemotaxis protein | CD58_RS20830 | Not Available | Negative | 4893714 - 4895678 | 69515.9 |
| plp-dependent aminotransferase family protein | CD58_RS20835 | Not Available | Negative | 4895797 - 4897185 | 50731.0 |
| sdr family oxidoreductase | CD58_RS20840 | Not Available | Negative | 4897391 - 4898152 | 26212.7 |
| nadp-dependent oxidoreductase | CD58_RS20845 | Not Available | Positive | 4898379 - 4899383 | 35519.1 |
| orotidine-5'-phosphate decarboxylase | CD58_RS20850 | Not Available | Negative | 4899507 - 4900205 | 24536.0 |
| response regulator | CD58_RS20855 | Not Available | Positive | 4900497 - 4901255 | 28820.7 |
| sensor histidine kinase | CD58_RS20860 | Not Available | Positive | 4901255 - 4902301 | 38553.5 |
| ef-hand domain-containing protein | CD58_RS20865 | Not Available | Positive | 4902529 - 4903371 | 28565.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
