Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | CD58_RS20770 | Not Available | Positive | 4884724 - 4885590 | 32919.2 |
| lrp/asnc family transcriptional regulator | CD58_RS20775 | Not Available | Negative | 4885632 - 4886063 | 15492.0 |
| ycze/yyas/yitt family protein | CD58_RS20780 | Not Available | Positive | 4886265 - 4886978 | 26558.9 |
| ammememoradisam system radical sam enzyme | CD58_RS20785 | Not Available | Positive | 4887078 - 4888562 | 55784.1 |
| trans-sulfuration enzyme family protein | CD58_RS20790 | Not Available | Positive | 4888559 - 4889704 | 42439.9 |
| plp-dependent aminotransferase family protein | CD58_RS20795 | Not Available | Positive | 4889767 - 4891023 | 46127.8 |
| lyse family translocator | CD58_RS20800 | Not Available | Negative | 4891074 - 4891706 | 22072.7 |
| Trna-gly | Not Available | Not Available | Positive | 4891984 - 4892059 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 4892063 - 4892138 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4892244 - 4892319 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
