Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpaf family protein | CD58_RS20720 | Not Available | Negative | 4876173 - 4877609 | 53259.4 |
| aaa family atpase | CD58_RS20725 | Not Available | Negative | 4877613 - 4878833 | 44171.4 |
| tade family protein | CD58_RS20730 | Not Available | Negative | 4878827 - 4879321 | 17727.5 |
| tade/tadg family type iv pilus assembly protein | CD58_RS20735 | Not Available | Negative | 4879321 - 4879800 | 16739.7 |
| tade/tadg family type iv pilus assembly protein | CD58_RS20740 | Not Available | Negative | 4879809 - 4881146 | 45687.6 |
| flp pilus assembly protein cpab | CD58_RS20745 | Not Available | Negative | 4881213 - 4882028 | 28504.6 |
| atpase aaa | CD58_RS20750 | Not Available | Negative | 4882044 - 4883372 | 49680.2 |
| prepilin peptidase | CD58_RS20755 | Not Available | Negative | 4883375 - 4883905 | 18609.6 |
| flp family type ivb pilin | CD58_RS20760 | Not Available | Negative | 4883932 - 4884123 | 6371.88 |
| flp family type ivb pilin | CD58_RS20765 | Not Available | Negative | 4884255 - 4884446 | 6392.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
