Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low molecular weight protein-tyrosine-phosphatase | CD58_RS20620 | Not Available | Negative | 4855964 - 4856428 | 17093.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | CD58_RS20625 | Not Available | Negative | 4856428 - 4857192 | 27750.4 |
| trm112 family protein | CD58_RS20630 | Not Available | Negative | 4857189 - 4857374 | 6616.16 |
| tetraacyldisaccharide 4'-kinase | CD58_RS20635 | Not Available | Negative | 4857398 - 4858408 | 37369.1 |
| exbd/tolr family protein | CD58_RS20640 | Not Available | Negative | 4858408 - 4858836 | 15363.6 |
| mota/tolq/exbb proton channel family protein | CD58_RS20645 | Not Available | Negative | 4858833 - 4859468 | 22801.3 |
| dna internalization-related competence protein comec/rec2 | CD58_RS20650 | Not Available | Negative | 4859565 - 4861811 | 81342.9 |
| duf2062 domain-containing protein | CD58_RS20655 | Not Available | Positive | 4861957 - 4862472 | 19833.7 |
| abc transporter permease | CD58_RS20660 | Not Available | Negative | 4863343 - 4864122 | 28536.0 |
| abc transporter atp-binding protein | CD58_RS20665 | Not Available | Negative | 4864119 - 4865051 | 34428.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
