Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | CD58_RS01580 | Not Available | Positive | 367051 - 367788 | 25695.1 |
| imidazole glycerol phosphate synthase subunit hisf | CD58_RS01585 | Not Available | Positive | 367798 - 368568 | 27238.6 |
| substrate-binding periplasmic protein | CD58_RS01590 | Not Available | Positive | 368632 - 369378 | 27641.5 |
| divergent polysaccharide deacetylase family protein | CD58_RS01595 | Not Available | Negative | 369572 - 370354 | 28364.4 |
| s41 family peptidase | CD58_RS01600 | Not Available | Negative | 370356 - 371672 | 46347.6 |
| murein hydrolase activator envc family protein | CD58_RS01605 | Not Available | Negative | 371705 - 372997 | 47740.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | CD58_RS01610 | Not Available | Negative | 373213 - 374742 | 55154.4 |
| rhodanese-like domain-containing protein | CD58_RS01615 | Not Available | Positive | 374895 - 375308 | 14459.8 |
| glutaredoxin 3 | CD58_RS01620 | Not Available | Positive | 375310 - 375564 | 9230.18 |
| protein-export chaperone secb | CD58_RS01625 | Not Available | Positive | 375604 - 376086 | 17739.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
