Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maf family protein | CD58_RS20570 | Not Available | Positive | 4842838 - 4843416 | 20801.3 |
| s49 family peptidase | CD58_RS20575 | Not Available | Negative | 4843564 - 4844553 | 35821.9 |
| had-ia family hydrolase | CD58_RS20580 | Not Available | Negative | 4844574 - 4845236 | 24476.0 |
| 23s rrna pseudouridine(955/2504/2580) synthase rluc | CD58_RS20585 | Not Available | Negative | 4845226 - 4846182 | 35609.6 |
| ribonuclease e | CD58_RS20590 | Not Available | Positive | 4846882 - 4850091 | 117523.0 |
| ntp transferase domain-containing protein | CD58_RS20595 | Not Available | Negative | 4850316 - 4850906 | 20399.6 |
| xdhc family protein | CD58_RS20600 | Not Available | Negative | 4850927 - 4851898 | 35330.8 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | CD58_RS20605 | Not Available | Negative | 4851898 - 4854213 | 83361.7 |
| (2fe-2s)-binding protein | CD58_RS20610 | Not Available | Negative | 4854210 - 4854680 | 16591.0 |
| udp-n-acetylmuramate dehydrogenase | CD58_RS20615 | Not Available | Negative | 4854948 - 4855967 | 37175.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
