Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | CD58_RS20470 | Not Available | Negative | 4826201 - 4827019 | 29551.6 |
| smp-30/gluconolactonase/lre family protein | CD58_RS20475 | Not Available | Negative | 4827256 - 4828131 | 31579.6 |
| fadr/gntr family transcriptional regulator | CD58_RS20480 | Not Available | Negative | 4828128 - 4828874 | 27268.6 |
| duf1285 domain-containing protein | CD58_RS20485 | Not Available | Negative | 4829049 - 4829609 | 20889.0 |
| duf4823 domain-containing protein | CD58_RS20490 | Not Available | Negative | 4829625 - 4830230 | 22279.6 |
| gtp 3',8-cyclase moaa | CD58_RS20495 | Not Available | Negative | 4830449 - 4831417 | 35268.1 |
| tetr/acrr family transcriptional regulator | CD58_RS20500 | Not Available | Negative | 4831554 - 4832192 | 24958.0 |
| tatd family hydrolase | CD58_RS20505 | Not Available | Negative | 4832577 - 4833371 | 29046.4 |
| pilz domain-containing protein | CD58_RS20510 | Not Available | Negative | 4833383 - 4833739 | 12850.5 |
| dna polymerase iii subunit delta' | CD58_RS20515 | Not Available | Negative | 4833782 - 4834768 | 35951.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
