Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactonate dehydratase | CD58_RS20420 | Not Available | Negative | 4816977 - 4818125 | 42259.6 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | CD58_RS20425 | Not Available | Negative | 4818175 - 4818795 | 21275.1 |
| 2-dehydro-3-deoxygalactonokinase | CD58_RS20430 | Not Available | Negative | 4818815 - 4819798 | 34709.6 |
| glutathione s-transferase family protein | CD58_RS20435 | Not Available | Positive | 4819985 - 4820617 | 23678.2 |
| gnat family n-acetyltransferase | CD58_RS20440 | Not Available | Negative | 4820623 - 4821105 | 17940.2 |
| hypothetical protein | CD58_RS20445 | Not Available | Positive | 4821283 - 4821630 | 11157.6 |
| rho termination factor n-terminal domain-containing protein | CD58_RS20450 | Not Available | Positive | 4821663 - 4822043 | 13821.3 |
| l-arabinose abc transporter permease arah | CD58_RS20455 | Not Available | Negative | 4822424 - 4823392 | 34070.1 |
| l-arabinose abc transporter atp-binding protein arag | CD58_RS20460 | Not Available | Negative | 4823403 - 4824947 | 55820.1 |
| substrate-binding domain-containing protein | CD58_RS20465 | Not Available | Negative | 4825022 - 4826026 | 36025.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
