Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | CD58_RS20370 | Not Available | Negative | 4806314 - 4807123 | 29969.5 |
| duf4398 domain-containing protein | CD58_RS20375 | Not Available | Negative | 4807120 - 4807479 | 13245.0 |
| substrate-binding periplasmic protein | CD58_RS20380 | Not Available | Negative | 4807489 - 4808313 | 29575.7 |
| electron transfer flavoprotein subunit alpha/fixb family protein | CD58_RS20385 | Not Available | Negative | 4808405 - 4809334 | 31357.6 |
| electron transfer flavoprotein subunit beta/fixa family protein | CD58_RS20390 | Not Available | Negative | 4809336 - 4810085 | 26304.1 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | CD58_RS20395 | Not Available | Positive | 4810631 - 4812295 | 60588.3 |
| arac family transcriptional regulator | CD58_RS20400 | Not Available | Negative | 4812479 - 4813369 | 32528.7 |
| nad(p)-dependent alcohol dehydrogenase | CD58_RS20405 | Not Available | Positive | 4813552 - 4814604 | 37636.4 |
| iclr family transcriptional regulator | CD58_RS20410 | Not Available | Negative | 4814611 - 4815414 | 29342.6 |
| mfs transporter | CD58_RS20415 | Not Available | Negative | 4815476 - 4816786 | 47302.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
