Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome | CD58_RS20320 | Not Available | Positive | 4797648 - 4798460 | 29634.7 |
| transglutaminase n-terminal domain-containing protein | CD58_RS20325 | Not Available | Negative | 4798636 - 4799439 | 30148.7 |
| metal abc transporter atp-binding protein | CD58_RS20330 | Not Available | Negative | 4799436 - 4800385 | 35586.3 |
| circularly permuted type 2 atp-grasp protein | CD58_RS20335 | Not Available | Negative | 4800396 - 4801805 | 52521.1 |
| ribonuclease e inhibitor rrab | CD58_RS20340 | Not Available | Negative | 4802127 - 4802468 | 12890.0 |
| hypothetical protein | CD58_RS20345 | Not Available | Negative | 4802672 - 4802908 | 8947.58 |
| start domain-containing protein | CD58_RS20350 | Not Available | Negative | 4803049 - 4803657 | 22305.7 |
| ykgj family cysteine cluster protein | CD58_RS20355 | Not Available | Negative | 4803711 - 4803965 | 8914.67 |
| hypothetical protein | CD58_RS20360 | Not Available | Negative | 4804112 - 4804585 | 16900.8 |
| plp-dependent aminotransferase family protein | CD58_RS20365 | Not Available | Negative | 4804671 - 4806113 | 53664.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
