Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | CD58_RS20270 | Not Available | Negative | 4787581 - 4788084 | 18427.9 |
| duf1778 domain-containing protein | CD58_RS20275 | Not Available | Positive | 4788703 - 4788990 | 10861.2 |
| hypothetical protein | CD58_RS20280 | Not Available | Positive | 4788948 - 4789469 | 18812.8 |
| Trna-ser | Not Available | Not Available | Positive | 4789603 - 4789692 | Not Available |
| crotonase/enoyl-coa hydratase family protein | CD58_RS20290 | Not Available | Positive | 4790001 - 4790690 | 24313.6 |
| 1-acylglycerol-3-phosphate o-acyltransferase | CD58_RS20295 | Not Available | Positive | 4790906 - 4791628 | 27044.6 |
| magnesium and cobalt transport protein cora | CD58_RS20300 | Not Available | Positive | 4791764 - 4792735 | 36662.1 |
| amidotransferase | CD58_RS20305 | Not Available | Negative | 4792839 - 4793573 | 27663.9 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | CD58_RS20310 | Not Available | Negative | 4793663 - 4795807 | 76179.3 |
| acetyl-coa c-acetyltransferase | CD58_RS20315 | Not Available | Negative | 4795833 - 4797038 | 42011.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
