Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system higa family antitoxin | CD58_RS20220 | Not Available | Negative | 4779205 - 4779843 | 23142.4 |
| type ii toxin-antitoxin system higb family toxin | CD58_RS20225 | Not Available | Negative | 4779840 - 4780172 | 12630.3 |
| 2-hydroxyacid dehydrogenase | CD58_RS20230 | Not Available | Negative | 4780330 - 4781286 | 33501.7 |
| sdr family oxidoreductase | CD58_RS20235 | Not Available | Negative | 4781319 - 4782077 | 26419.0 |
| fumarylacetoacetate hydrolase family protein | CD58_RS20240 | Not Available | Negative | 4782120 - 4782812 | 24792.6 |
| mfs transporter | CD58_RS20245 | Not Available | Negative | 4782914 - 4784263 | 48792.1 |
| helix-turn-helix transcriptional regulator | CD58_RS20250 | Not Available | Positive | 4784818 - 4785753 | 35900.2 |
| gnat family n-acetyltransferase | CD58_RS20255 | Not Available | Positive | 4785828 - 4786301 | 17639.0 |
| integrase | CD58_RS20260 | Not Available | Negative | 4786319 - 4786546 | 8030.93 |
| duf1206 domain-containing protein | CD58_RS20265 | Not Available | Positive | 4786758 - 4787579 | 29152.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
