Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS20175 | Not Available | Positive | 4771497 - 4771775 | 10025.0 |
| metal abc transporter atp-binding protein | CD58_RS31525 | Not Available | Positive | 4771940 - 4772196 | 9213.09 |
| gnat family n-acetyltransferase | CD58_RS20180 | Not Available | Negative | 4772193 - 4772696 | 18569.5 |
| smi1/knr4 family protein | CD58_RS20185 | Not Available | Negative | 4773256 - 4773879 | 23277.3 |
| suppressor of fused domain protein | CD58_RS20190 | Not Available | Negative | 4773970 - 4774785 | 29299.5 |
| sterol desaturase family protein | CD58_RS20195 | Not Available | Negative | 4774782 - 4775879 | 41749.4 |
| hypothetical protein | CD58_RS20200 | Not Available | Negative | 4775939 - 4776658 | 26074.1 |
| diaminopimelate epimerase | CD58_RS20205 | Not Available | Negative | 4776843 - 4777664 | 28983.4 |
| gnat family n-acetyltransferase | CD58_RS20210 | Not Available | Negative | 4777734 - 4778288 | 21415.6 |
| class i sam-dependent methyltransferase | CD58_RS20215 | Not Available | Negative | 4778367 - 4779137 | 28318.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
