Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CD58_RS20130 | Not Available | Negative | 4762083 - 4763006 | 33483.2 |
| 3-oxoacyl-acp reductase family protein | CD58_RS20135 | Not Available | Positive | 4763132 - 4763878 | 25232.1 |
| had-ia family hydrolase | CD58_RS20140 | Not Available | Negative | 4763962 - 4764657 | 25302.5 |
| hypothetical protein | CD58_RS20145 | Not Available | Negative | 4764852 - 4765217 | 10951.1 |
| hypothetical protein | CD58_RS20150 | Not Available | Negative | 4765306 - 4765509 | 7093.6 |
| hypothetical protein | CD58_RS31280 | Not Available | Negative | 4765578 - 4765751 | 6135.72 |
| glycine zipper domain-containing protein | CD58_RS20155 | Not Available | Negative | 4765871 - 4766281 | 12338.7 |
| hypothetical protein | CD58_RS20160 | Not Available | Negative | 4766601 - 4766858 | 9362.29 |
| response regulator | CD58_RS20165 | Not Available | Negative | 4766943 - 4769132 | 80191.7 |
| is256 family transposase | CD58_RS20170 | Not Available | Negative | 4769708 - 4770958 | 46841.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
