Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter atp-binding protein | CD58_RS01530 | Not Available | Negative | 357553 - 358499 | 35561.9 |
| Trna-phe | Not Available | Not Available | Positive | 358848 - 358923 | Not Available |
| oxidative damage protection protein | CD58_RS01540 | Not Available | Negative | 359026 - 359298 | 10492.5 |
| a/g-specific adenine glycosylase | CD58_RS01545 | Not Available | Negative | 359295 - 360362 | 39869.1 |
| asma family protein | CD58_RS01550 | Not Available | Negative | 360359 - 362584 | 80056.4 |
| aspartate 1-decarboxylase autocleavage activator panm | CD58_RS01555 | Not Available | Negative | 362857 - 363255 | 14616.6 |
| ofa family mfs transporter | CD58_RS01560 | Not Available | Positive | 363518 - 365179 | 58763.8 |
| imidazoleglycerol-phosphate dehydratase hisb | CD58_RS01565 | Not Available | Positive | 365473 - 366066 | 21926.3 |
| imidazole glycerol phosphate synthase subunit hish | CD58_RS01570 | Not Available | Positive | 366066 - 366704 | 23448.9 |
| duf2164 domain-containing protein | CD58_RS01575 | Not Available | Positive | 366704 - 366961 | 10103.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
