Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylcitrate synthase | CD58_RS20080 | Not Available | Negative | 4751762 - 4752889 | 41812.0 |
| methylisocitrate lyase | CD58_RS20085 | Not Available | Negative | 4752946 - 4753830 | 31831.1 |
| gntr family transcriptional regulator | CD58_RS20090 | Not Available | Negative | 4753827 - 4754537 | 26942.1 |
| atp-dependent zinc protease | CD58_RS20095 | Not Available | Positive | 4754818 - 4755354 | 19436.5 |
| inactive transglutaminase family protein | CD58_RS20100 | Not Available | Positive | 4755360 - 4756892 | 56842.2 |
| alpha-l-glutamate ligase-like protein | CD58_RS20105 | Not Available | Positive | 4756892 - 4757878 | 36104.9 |
| aminodeoxychorismate synthase component i | CD58_RS20110 | Not Available | Positive | 4758157 - 4759500 | 48764.8 |
| bifunctional phosphoserine phosphatase/homoserine phosphotransferase thrh | CD58_RS20115 | Not Available | Negative | 4759616 - 4760233 | 23450.3 |
| phosphoadenylyl-sulfate reductase | CD58_RS20120 | Not Available | Positive | 4760407 - 4761147 | 28355.7 |
| aspartate/glutamate racemase family protein | CD58_RS20125 | Not Available | Positive | 4761208 - 4761936 | 25791.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
